Molecular identification and function of cis- and trans-acting determinants for petA transcript stability in Chlamydomonas reinhardtii chloroplasts (Q42407150)

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scientific article published on 23 June 2008

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English	Molecular identification and function of cis- and trans-acting determinants for petA transcript stability in Chlamydomonas reinhardtii chloroplasts	scientific article published on 23 June 2008

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scholarly article

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Europe PubMed Central

PMC publication ID

29 October 2017

Molecular identification and function of cis- and trans-acting determinants for petA transcript stability in Chlamydomonas reinhardtii chloroplasts (English)

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Europe PubMed Central

PMC publication ID

29 October 2017

Chlamydomonas reinhardtii

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based on heuristic

inferred from title

5

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29 October 2017

7

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Europe PubMed Central

PMC publication ID

29 October 2017

author name string

Christelle Loiselay

1

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PMC publication ID

29 October 2017

Nicola J Gumpel

2

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Europe PubMed Central

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29 October 2017

Jacqueline Girard-Bascou

3

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Europe PubMed Central

PMC publication ID

29 October 2017

Adam T Watson

4

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29 October 2017

Francis-André Wollman

6

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29 October 2017

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publication date

23 June 2008

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29 October 2017

Molecular and Cellular Biology

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29 October 2017

28

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29 October 2017

17

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Europe PubMed Central

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29 October 2017

5529-5542

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29 October 2017

describes a project that uses

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11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC2519735/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

Evidence for regulatory function of nucleus-encoded factors on mRNA stabilization and translation in the chloroplast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

Conserved domain structure of pentatricopeptide repeat proteins involved in chloroplast RNA editing

1 reference

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28 May 2018

Cytoplasmic male sterility of rice with boro II cytoplasm is caused by a cytotoxic peptide and is restored by two related PPR motif genes via distinct modes of mRNA silencing

1 reference

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28 May 2018

RNA editing in plant organelles: machinery, physiological function and evolution

1 reference

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28 May 2018

Nuclear mutations specifically affect the synthesis and/or degradation of the chloroplast-encoded D2 polypeptide of photosystem II in Chlamydomonas reinhardtii

1 reference

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28 May 2018

Translation of chloroplast psbD mRNA in Chlamydomonas is controlled by a secondary RNA structure blocking the AUG start codon

1 reference

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28 May 2018

Chloroplast biogenesis of photosystem II cores involves a series of assembly-controlled steps that regulate translation

1 reference

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28 May 2018

RNA immunoprecipitation and microarray analysis show a chloroplast Pentatricopeptide repeat protein to be associated with the 5' region of mRNAs whose translation it activates

1 reference

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28 May 2018

A spontaneous tRNA suppressor of a mutation in the Chlamydomonas reinhardtii nuclear MCD1 gene required for stability of the chloroplast petD mRNA.

1 reference

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28 May 2018

Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis

1 reference

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28 May 2018

Cooperation of endo- and exoribonucleases in chloroplast mRNA turnover

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

Biogenesis of PSI involves a cascade of translational autoregulation in the chloroplast of Chlamydomonas

1 reference

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28 May 2018

Tab2 is a novel conserved RNA binding protein required for translation of the chloroplast psaB mRNA

1 reference

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28 May 2018

The proteome of Saccharomyces cerevisiae mitochondria

1 reference

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28 May 2018

Mfold web server for nucleic acid folding and hybridization prediction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

Identification of the fertility restoration locus, Rfo, in radish, as a member of the pentatricopeptide‐repeat protein family

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

Translational regulations as specific traits of chloroplast gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

Modular recognition of RNA by a human pumilio-homology domain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

TCA1, a single nuclear-encoded translational activator specific for petA mRNA in Chlamydomonas reinhardtii chloroplast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

Specific sequence elements in the 5' untranslated regions of rbcL and atpB gene mRNas stabilize transcripts in the chloroplast of Chlamydomonas reinhardtii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

The light sensitivity of ATP synthase mutants of Chlamydomonas reinhardtii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

Crystal structure of a Pumilio homology domain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

Characterization of Mbb1, a nucleus-encoded tetratricopeptide-like repeat protein required for expression of the chloroplast psbB/psbT/psbH gene cluster in Chlamydomonas reinhardtii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

cis- and trans-Acting determinants for translation of psbD mRNA in Chlamydomonas reinhardtii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

Translation in chloroplasts.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

Processing and degradation of chloroplast mRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

Participation of nuclear genes in chloroplast gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

The Nac2 gene of Chlamydomonas encodes a chloroplast TPR-like protein involved in psbD mRNA stability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

The PPR motif - a TPR-related motif prevalent in plant organellar proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

5' to 3' exoribonucleolytic activity is a normal component of chloroplast mRNA decay pathways

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

Molecular cloning of the maize gene crp1 reveals similarity between regulators of mitochondrial and chloroplast gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

In vivo evidence for 5'-->3' exoribonuclease degradation of an unstable chloroplast mRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

The chloroplast atpA gene cluster in Chlamydomonas reinhardtii. Functional analysis of a polycistronic transcription unit

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

High-efficiency transformation of Chlamydomonas reinhardtii by electroporation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

Translation of cytochrome f is autoregulated through the 5' untranslated region of petA mRNA in Chlamydomonas chloroplasts.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

Selectable marker recycling in the chloroplast.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

In vivo analysis of Chlamydomonas chloroplast petD gene expression using stable transformation of beta-glucuronidase translational fusions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

Initiation codon mutations in the Chlamydomonas chloroplast petD gene result in temperature-sensitive photosynthetic growth.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

The assembly of cytochrome b6/f complexes: an approach using genetic transformation of the green alga Chlamydomonas reinhardtii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

petD mRNA maturation in Chlamydomonas reinhardtii chloroplasts: role of 5' endonucleolytic processing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

The petD gene is transcribed by functionally redundant promoters in Chlamydomonas reinhardtii chloroplasts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

Determinants for stability of the chloroplast psbD RNA are located within its short leader region in Chlamydomonas reinhardtii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

A nuclear mutation in maize blocks the processing and translation of several chloroplast mRNAs and provides evidence for the differential translation of alternative mRNA forms.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

The 5' leader of a chloroplast mRNA mediates the translational requirements for two nucleus-encoded functions in Chlamydomonas reinhardtii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

The product of the nuclear gene PET309 is required for translation of mature mRNA and stability or production of intron-containing RNAs derived from the mitochondrial COX1 locus of Saccharomyces cerevisiae

1 reference

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Nucleo-Mitochondrial Interactions in Mitochondrial Gene Expression

1 reference

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28 May 2018

Biogenesis of photosystem II complexes: transcriptional, translational, and posttranslational regulation

1 reference

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28 May 2018

Nuclear and chloroplast mutations affect the synthesis or stability of the chloroplast psbC gene product in Chlamydomonas reinhardtii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

Transgenic expression of aminoglycoside adenine transferase in the chloroplast: a selectable marker of site-directed transformation of chlamydomonas

1 reference

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28 May 2018

Accumulation of chloroplast psbB RNA requires a nuclear factor in Chlamydomonas reinhardtii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

28 May 2018

Synthesis of the D2 protein of photosystem II in Chlamydomonas is controlled by a high molecular mass complex containing the RNA stabilization factor Nac2 and the translational activator RBP40.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

16 August 2018

A pentatricopeptide repeat protein facilitates the trans-splicing of the maize chloroplast rps12 pre-mRNA.

1 reference

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16 August 2018

Cytochrome f from the Antarctic psychrophile, Chlamydomonas raudensis UWO 241: structure, sequence, and complementation in the mesophile, Chlamydomonas reinhardtii

1 reference

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16 August 2018

RNA‐binding properties of HCF152, an Arabidopsis PPR protein involved in the processing of chloroplast RNA

1 reference

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16 August 2018

Cytochrome f translation in Chlamydomonas chloroplast is autoregulated by its carboxyl-terminal domain.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

16 August 2018

Cbp1 is required for translation of the mitochondrial cytochrome b mRNA of Saccharomyces cerevisiae

1 reference

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16 August 2018

Searching limiting steps in the expression of chloroplast-encoded proteins: relations between gene copy number, transcription, transcript abundance and translation rate in the chloroplast of Chlamydomonas reinhardtii.

1 reference

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Crystallization and characterization of Pumilo: a novel RNA binding protein.

1 reference

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16 August 2018

Inversions in the Chlamydomonas chloroplast genome suppress a petD 5' untranslated region deletion by creating functional chimeric mRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519735

16 August 2018

A hypothesis on the identification of the editing enzyme in plant organelles

1 reference

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1 December 2018

Nuclear suppressors define three factors that participate in both 5' and 3' end processing of mRNAs in Chlamydomonas chloroplasts

1 reference

https://pubmed.ncbi.nlm.nih.gov/18573878

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chloroplast RNA Stability in Chlamydomonas: Rapid Degradation of psbB and psbC Transcripts in Two Nuclear Mutants

1 reference

https://pubmed.ncbi.nlm.nih.gov/18573878

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of cis-acting RNA leader elements required for chloroplast psbD gene expression in Chlamydomonas

1 reference

https://pubmed.ncbi.nlm.nih.gov/18573878

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evidence for Nuclear Control of the Expression of the atpA and atpB Chloroplast Genes in Chlamydomonas

1 reference

https://pubmed.ncbi.nlm.nih.gov/18573878

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Stability determinants in the chloroplast psbB/T/H mRNAs of Chlamydomonas reinhardtii

1 reference

https://pubmed.ncbi.nlm.nih.gov/18573878

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mutation at the Chlamydomonas nuclear NAC2 locus specifically affects stability of the chloroplast psbD transcript encoding polypeptide D2 of PS II

1 reference

https://pubmed.ncbi.nlm.nih.gov/18573878

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chloroplast transformation in Chlamydomonas

1 reference

https://pubmed.ncbi.nlm.nih.gov/18573878

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

HCF152, an Arabidopsis RNA binding pentatricopeptide repeat protein involved in the processing of chloroplast psbB-psbT-psbH-petB-petD RNAs

1 reference

https://pubmed.ncbi.nlm.nih.gov/18573878

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A nucleus-encoded suppressor defines a new factor which can promote petD mRNA stability in the chloroplast of Chlamydomonas reinhardtii

1 reference

https://pubmed.ncbi.nlm.nih.gov/18573878

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Function of the Chlamydomonas reinhardtii petd 5' untranslated region in regulating the accumulation of subunit IV of the cytochrome b6/f complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/18573878

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nuclear mutants of Chlamydomonas reinhardtii defective in the biogenesis of the cytochrome b6f complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/18573878

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/MCB.02056-07

1 reference

Europe PubMed Central

PMC publication ID

29 October 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

29 October 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

29 October 2017

ResearchGate publication ID

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