The diversity of H3 loops determines the antigen-binding tendencies of antibody CDR loops. (Q41779079)

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scientific article published on 8 January 2016

Language	Label	Description	Also known as
English	The diversity of H3 loops determines the antigen-binding tendencies of antibody CDR loops.	scientific article published on 8 January 2016

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scholarly article

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26749247%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

The diversity of H3 loops determines the antigen-binding tendencies of antibody CDR loops (English)

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26749247%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

Kenji Mizuguchi

2

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26749247%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

author name string

Yuko Tsuchiya

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26749247%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

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publication date

20 January 2016

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4 March 2020

Protein Science

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26749247%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

25

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26749247%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

4

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26749247%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

815-825

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26749247%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

SAbDab: the structural antibody database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941225

6 June 2018

Prediction of site-specific interactions in antibody-antigen complexes: the proABC method and server

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941225

6 June 2018

Paratome: an online tool for systematic identification of antigen-binding regions in antibodies based on sequence or structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941225

6 June 2018

Structural consensus among antibodies defines the antigen binding site

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941225

6 June 2018

A new clustering of antibody CDR loop conformations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941225

6 June 2018

Integration of biological networks and gene expression data using Cytoscape

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941225

6 June 2018

MUSTANG: a multiple structural alignment algorithm

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941225

6 June 2018

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941225

6 June 2018

Cytoscape: a software environment for integrated models of biomolecular interaction networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941225

6 June 2018

IMGT unique numbering for immunoglobulin and T cell receptor variable domains and Ig superfamily V-like domains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941225

6 June 2018

H3-rules: identification of CDR-H3 structures in antibodies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941225

6 June 2018

Standard conformations for the canonical structures of immunoglobulins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941225

6 June 2018

Structural families in loops of homologous proteins: automatic classification, modelling and application to antibodies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941225

6 June 2018

Antibody-antigen interactions: contact analysis and binding site topography.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941225

6 June 2018

Satisfying hydrogen bonding potential in proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941225

6 June 2018

An analysis of the sequences of the variable regions of Bence Jones proteins and myeloma light chains and their implications for antibody complementarity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941225

6 June 2018

Conformations of immunoglobulin hypervariable regions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941225

6 June 2018

Conformation of beta-hairpins in protein structures. A systematic classification with applications to modelling by homology, electron density fitting and protein engineering

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941225

6 June 2018

The indistinguishability of epitopes from protein surface is explained by the distinct binding preferences of each of the six antigen-binding loops

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941225

18 August 2018

Structural classification of CDR-H3 revisited: a lesson in antibody modeling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941225

18 August 2018

eF-site and PDBjViewer: database and viewer for protein functional sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941225

18 August 2018

Conformations of the third hypervariable region in the VH domain of immunoglobulins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941225

18 August 2018

Conformation of β-hairpins in protein structures

1 reference

https://api.crossref.org/works/10.1002%2FPRO.2874

21 January 2018

Analyzing and visualizing residue networks of protein structures

1 reference

https://api.crossref.org/works/10.1002%2FPRO.2874

21 January 2018

Identification of specificity-determining residues in antibodies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4941225

2 December 2018

A systematic comparison of free and bound antibodies reveals binding-related conformational changes

1 reference

https://pubmed.ncbi.nlm.nih.gov/26749247

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Canonical structures for the hypervariable regions of immunoglobulins

1 reference

https://pubmed.ncbi.nlm.nih.gov/26749247

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural classification of CDR-H3 in antibodies

1 reference

https://pubmed.ncbi.nlm.nih.gov/26749247

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1002/PRO.2874

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26749247%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26749247%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26749247%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

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