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F2 coagulation factor II, thrombin [ Lethenteron reissneri (Far Eastern brook lamprey) ]

Gene ID: 133351367, updated on 29-Mar-2024

Summary

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Gene symbol
F2
Gene description
coagulation factor II, thrombin
Gene type
protein coding
RefSeq status
MODEL
Organism
Lethenteron reissneri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Lethenteron
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 37
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_12 current ASM1570882v1 (GCF_015708825.1) 37 NC_083815.1 (463777..474415, complement)

Chromosome 37 - NC_083815.1Genomic Context describing neighboring genes Neighboring gene formin binding protein 4 Neighboring gene RNA binding motif protein 28 Neighboring gene complement C1q tumor necrosis factor-related protein 4-like Neighboring gene autophagy related 13

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_083815.1 Chromosome 37 Reference ASM1570882v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in blood coagulation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in platelet activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of blood coagulation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prothrombin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_015708825.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1570882v1 Primary Assembly

Genomic

  1. NC_083815.1 Reference ASM1570882v1 Primary Assembly

    Range
    463777..474415 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061566510.1 → XP_061422494.1  prothrombin

Nucleotide Protein
Heading Accession and Version

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