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PDE5A phosphodiesterase 5A [ Hemicordylus capensis (graceful crag lizard) ]

Gene ID: 128327696, updated on 25-Mar-2024

Summary

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Gene symbol
PDE5A
Gene description
phosphodiesterase 5A
Gene type
protein coding
RefSeq status
MODEL
Organism
Hemicordylus capensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Scinciformata; Cordyloidea; Cordylidae; Hemicordylus
Orthologs
human mouse all
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Genomic context

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See PDE5A in Genome Data Viewer
Location:
chromosome: 5
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2023_02 current rHemCap1.1.pri (GCF_027244095.1) 5 NC_069661.1 (44199400..44317422, complement)

Chromosome 5 - NC_069661.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128325784 Neighboring gene ubiquitin specific peptidase 53 Neighboring gene fatty acid binding protein 2 Neighboring gene ribosomal protein L7 like 1 Neighboring gene mitotic arrest deficient 2 like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069661.1 Chromosome 5 Reference rHemCap1.1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cGMP-specific 3',5'-cyclic phosphodiesterase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027244095.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rHemCap1.1.pri

Genomic

  1. NC_069661.1 Reference rHemCap1.1.pri

    Range
    44199400..44317422 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053256800.1 → XP_053112775.1  cGMP-specific 3',5'-cyclic phosphodiesterase isoform X6

  2. XM_053256795.1 → XP_053112770.1  cGMP-specific 3',5'-cyclic phosphodiesterase isoform X3

  3. XM_053256794.1 → XP_053112769.1  cGMP-specific 3',5'-cyclic phosphodiesterase isoform X2

  4. XM_053256793.1 → XP_053112768.1  cGMP-specific 3',5'-cyclic phosphodiesterase isoform X1

  5. XM_053256797.1 → XP_053112772.1  cGMP-specific 3',5'-cyclic phosphodiesterase isoform X4

  6. XM_053256798.1 → XP_053112773.1  cGMP-specific 3',5'-cyclic phosphodiesterase isoform X5

  7. XM_053256799.1 → XP_053112774.1  cGMP-specific 3',5'-cyclic phosphodiesterase isoform X6

  8. XM_053256801.1 → XP_053112776.1  cGMP-specific 3',5'-cyclic phosphodiesterase isoform X6

Nucleotide Protein
Heading Accession and Version

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