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GPR50 G protein-coupled receptor 50 [ Cygnus atratus (black swan) ]

Gene ID: 118245247, updated on 20-Mar-2024

Summary

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Gene symbol
GPR50
Gene description
G protein-coupled receptor 50
See related
EnsemblRapid:ENSACYG00000003494
Gene type
protein coding
RefSeq status
MODEL
Organism
Cygnus atratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus
Orthologs
human mouse all
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Genomic context

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See GPR50 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_02 current CAtr_DNAZoo_HiC_assembly (GCF_013377495.2) 13 NC_066374.1 (7734008..7754557, complement)
100 previous assembly Cygnus_atratus_primary_v1.0 (GCF_013377495.1) Unplaced Scaffold NW_023336594.1 (13639165..13659714)

Chromosome 13 - NC_066374.1Genomic Context describing neighboring genes Neighboring gene PAS domain containing repressor 1 Neighboring gene uncharacterized LOC118245249 Neighboring gene vacuolar ATPase assembly factor VMA21 Neighboring gene uncharacterized LOC126913462 Neighboring gene high mobility group box 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables melatonin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
melatonin-related receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_013377495.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAtr_DNAZoo_HiC_assembly Primary Assembly

Genomic

  1. NC_066374.1 Reference CAtr_DNAZoo_HiC_assembly Primary Assembly

    Range
    7734008..7754557 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035541216.1 → XP_035397109.1  melatonin-related receptor

    Related
    ENSACYP00000005867.1, ENSACYT00000006420.1
    Conserved Domains (1) summary
    cd15401
    Location:25 → 303
    7tmA_Mel1C; melatonin receptor subtype 1C, member of the class A family of seven-transmembrane G protein-coupled receptors
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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