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LOC105118148 dipeptidyl peptidase 9-like [ Populus euphratica (Euphrates poplar) ]

Gene ID: 105118148, updated on 1-Aug-2024

Summary

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Gene symbol
LOC105118148
Gene description
dipeptidyl peptidase 9-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus euphratica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC105118148 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current PopEup_1.0 (GCF_000495115.1) Unplaced Scaffold NW_011501609.1 (8923..14408, complement)

NW_011501609.1Genomic Context describing neighboring genes Neighboring gene putative F-box protein At3g23260 Neighboring gene uncharacterized LOC105118150 Neighboring gene fasciclin-like arabinogalactan protein 12 Neighboring gene calcineurin B-like protein 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011501609.1 Unplaced Scaffold Reference PopEup_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dipeptidyl-peptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type peptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dipeptidyl peptidase 9-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus euphratica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PopEup_1.0 Primary Assembly

Genomic

  1. NW_011501609.1 Reference PopEup_1.0 Primary Assembly

    Range
    8923..14408 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011016028.1 → XP_011014330.1  dipeptidyl peptidase 9-like isoform X1

    See identical proteins and their annotated locations for XP_011014330.1

    UniProtKB/TrEMBL
    A0AAJ6TNY3
    Conserved Domains (3) summary
    COG1506
    Location:429 → 777
    DAP2; Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism]
    pfam00326
    Location:577 → 777
    Peptidase_S9; Prolyl oligopeptidase family
    pfam00930
    Location:145 → 491
    DPPIV_N; Dipeptidyl peptidase IV (DPP IV) N-terminal region

  2. XM_011016027.1 → XP_011014329.1  dipeptidyl peptidase 9-like isoform X1

    See identical proteins and their annotated locations for XP_011014329.1

    UniProtKB/TrEMBL
    A0AAJ6TNY3
    Conserved Domains (3) summary
    COG1506
    Location:429 → 777
    DAP2; Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism]
    pfam00326
    Location:577 → 777
    Peptidase_S9; Prolyl oligopeptidase family
    pfam00930
    Location:145 → 491
    DPPIV_N; Dipeptidyl peptidase IV (DPP IV) N-terminal region

  3. XM_011016030.1 → XP_011014332.1  dipeptidyl peptidase 9-like isoform X1

    See identical proteins and their annotated locations for XP_011014332.1

    UniProtKB/TrEMBL
    A0AAJ6TNY3
    Conserved Domains (3) summary
    COG1506
    Location:429 → 777
    DAP2; Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism]
    pfam00326
    Location:577 → 777
    Peptidase_S9; Prolyl oligopeptidase family
    pfam00930
    Location:145 → 491
    DPPIV_N; Dipeptidyl peptidase IV (DPP IV) N-terminal region

  4. XM_011016029.1 → XP_011014331.1  dipeptidyl peptidase 9-like isoform X1

    See identical proteins and their annotated locations for XP_011014331.1

    UniProtKB/TrEMBL
    A0AAJ6TNY3
    Conserved Domains (3) summary
    COG1506
    Location:429 → 777
    DAP2; Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism]
    pfam00326
    Location:577 → 777
    Peptidase_S9; Prolyl oligopeptidase family
    pfam00930
    Location:145 → 491
    DPPIV_N; Dipeptidyl peptidase IV (DPP IV) N-terminal region

  5. XM_011016031.1 → XP_011014333.1  dipeptidyl peptidase 9-like isoform X2

    UniProtKB/TrEMBL
    A0AAJ6XCZ1
    Conserved Domains (3) summary
    COG1506
    Location:247 → 595
    DAP2; Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism]
    pfam00326
    Location:395 → 595
    Peptidase_S9; Prolyl oligopeptidase family
    pfam00930
    Location:1 → 309
    DPPIV_N; Dipeptidyl peptidase IV (DPP IV) N-terminal region
Nucleotide Protein
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