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Branchiostoma floridae (Florida lancelet): 118429477
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Entry
118429477 CDS
T01074
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B-like isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118429477
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118429477
Ion channels [BR:
bfo04040
]
Ligand-gated channels
Glutamate (ionotropic)
118429477
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan-Glu_bd
Lig_chan
ANF_receptor
SBP_bac_3
PcrB
Motif
Other DBs
NCBI-GeneID:
118429477
NCBI-ProteinID:
XP_035695862
UniProt:
A0A9J7M7C4
LinkDB
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Position
13:complement(12945661..13018495)
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AA seq
1084 aa
AA seq
DB search
MKVLVGLYCLTCVSVLRAQRIGSSRRICGSDRTAPEIKLGGMFVEQSMVQPYRDAVIEAN
YRSGQTLEIKPLEKVLKNVTPDNIVRSMCEDLVKKGVNAVIYGGDEDNVKSTLYVKQIAG
ELGMPILMAGGGSSEILHSQDNPFYPLLLRSSIAQQVEVIIAVLKLQRWYRFSVVTSEMP
GHRLFQKTLRDKVANFKENEEKGVWSIYRTFTLNVHPTSSVQDVKAQLVGRNMSQVVLLY
CSKREAKTIFQAAGALGYTSEDFVWIAAESVIGDFTKLREAPPQYPVGLLSLVSQSQKYN
KEATIRTGVLLYMEALRQYIQDGNSVSDLQTYNCRNIRGTRSSNATKLLYRYLTSTTIED
LDIKFNEDGTTTISTFDIMNVDGRKLWERVGSWNKDSLYMEGVTWPGNKASPPNGISKDK
HIRIVAVLEHPFITATEPDITGECHNTVECKKINRTARGGIKMCCTGFCIDLLKELARDV
MFSYDLYLVPDNKHGKYEKGKWTGCIGELVKGHAQMALGSITITKERATVVDFSMPFVET
GISVMTRRRKGVVPATAFLEPFDVFAWMAMFAVCLSCVAFTVMAFEFFSPEGYAGNLHPS
DDAPPRASEAGRFTVGKAFWLLWALIFNNSVPVENPRGATSKYMITFWAFFAVIFLATYT
ANLAAFMIQEEYTEAITGLTDEKFSNPYAHSFRFGTKPNGSTEAFIAKNFRRMHEYMNRY
NQPSVNAAITALKGGTLDAFIYDAAVLNYEAGKDEGCQLRTIAHGNVFATTGYGIGFPKN
SEWVDDIDLALLSYFANGKLEELHELWLTGSCNQASSDLDTHPLGIENTAGVFYLLLAAI
VLSIVILFLEHFFYRCLREPLRRCEFDKKELLAIVSRGTHGCLKGEEVGRKRKKRKRSEV
EADVIMATRAFAYSSVKHSKPYMSELYAEDNENESENAKGKDAIEKAFVNHLVSAVSNKR
QNLPNPFLKPDRPRMSRSAHQSPVMRPQQPLHNPFLRQPSPRRRSFHELHLNTFPMNPKP
RTRNVHTVVGVSPFLKHVNANHQANYLRQDNPPRPRSAVEFPFKELEPNGIVLQRLPGRR
ESAV
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtactagtcggcctgtactgccttacttgcgtgtccgtgctgcgggcacagagg
atcggatcatcaagaaggatctgcgggagcgatcggacagcacctgagataaaactggga
ggtatgttcgtagaacaaagcatggtgcaaccttacagagatgctgtgatagaggcgaac
tatcgcagcggccagaccctggaaatcaagccgcttgagaaagtcctgaagaatgtgact
cccgacaatattgtcaggagcatgtgtgaagatttggtgaagaagggagtaaacgctgtc
atctatggaggtgatgaggacaacgtcaagtcgactttgtatgtgaagcaaatagcagga
gagctaggaatgcccatccttatggctgggggaggaagctcggaaattctgcattctcag
gataaccccttctacccgctgctgctaagaagctccatagcccagcaggttgaggtgata
atcgccgtgctgaagctgcagcgctggtaccggttctccgtggtgaccagtgagatgcca
ggacatcggctcttccagaagacactgagagacaaggtcgccaacttcaaagagaatgag
gaaaaaggagtgtggtctatctatagaacctttacgttaaacgtccacccgaccagctca
gttcaagacgtgaaagctcaactggttggaagaaacatgtcacaagtcgttctgctctat
tgttccaagagagaagcgaagaccattttccaggctgccggggcgttagggtacaccagc
gaggattttgtttggattgcagcagaatcagttataggagatttcacgaagctcagagag
gccccaccgcagtatccagtcggactgttgtctctggtgtcacaaagtcaaaaatataat
aaggaagctaccatcaggacaggtgttttgctgtacatggaggctttgagacagtacatt
caggacggaaattctgtcagcgatctacaaacatacaactgcagaaacatcagaggaact
cggtcttcaaatgcaaccaagttactttacagataccttaccagcacaacaatagaagat
ttggatataaagttcaacgaggacggcaccacgacgattagcactttcgacatcatgaac
gtggacggtaggaagttatgggaacgggtgggaagctggaataaagacagcctgtacatg
gaaggggtgacatggccggggaataaggcatctcctcctaacggaatctctaaggacaaa
cacatccgtattgttgccgtcctggagcaccccttcattacggccaccgagccggacatc
acaggagagtgtcataacactgtggaatgcaagaaaataaaccgtaccgccaggggaggg
atcaagatgtgctgtacgggattctgcatcgacctgctgaaggagctggccagagacgtc
atgttctcctacgacctgtacctggtgccggacaacaaacacggcaaatacgagaaggga
aaatggacgggctgcataggcgagctcgtgaagggtcacgcccaaatggccctagggtcc
attacaattaccaaagagagagcgacggttgtcgacttttccatgccgtttgtggagacg
gggatatccgtcatgaccaggagacggaagggggtcgtgccagccacagcatttctagaa
cctttcgatgttttcgcatggatggcgatgtttgcggtgtgcctgtcgtgcgtagctttt
accgttatggccttcgagttcttcagtccggagggatacgcgggcaaccttcacccgtca
gatgacgctccaccaagagcaagtgaagctggcagattcacagtgggaaaagctttctgg
ctcctctgggccctcatcttcaacaactccgtgccagttgagaatcctcgcggtgcgacc
agcaagtacatgatcaccttctgggcgttcttcgccgtcatcttcctggcgacctacaca
gccaacctggcagctttcatgatccaggaggagtacacggaggccattaccgggctgaca
gacgaaaagttcagcaatccgtacgcccactcattcaggttcggaacgaaacccaacggc
agtaccgaagcttttattgccaagaatttcaggagaatgcacgagtacatgaataggtac
aaccaaccgagcgtcaatgccgcaataacagccctaaagggaggcaccctggacgccttc
atctacgatgccgccgtgctgaactacgaagcggggaaggacgaaggctgtcaactccga
accatcgcgcacggcaatgtgttcgccaccaccggctacggtataggctttcccaagaac
tcggagtgggtcgacgatatcgacctcgctctcctttcgtattttgcgaatggtaaactg
gaagagctgcacgaactgtggctgacaggatcgtgcaaccaggcgtcgtctgatctggac
acccacccgctcggcatagagaacaccgctggagtgttctacctcctcctggccgccata
gtcctcagcatcgtcatcctgtttctagagcacttcttctacaggtgcttacgggagcca
ctgaggcggtgtgaattcgacaagaaagaactattggcaatcgttagcaggggcacccac
ggctgtttgaagggagaggaggttgggcggaagaggaaaaagaggaaaagatctgaagtg
gaagcggacgttataatggcgaccagggcgtttgcttacagttcagtcaagcatagcaaa
ccttacatgtcagagttgtatgccgaagataacgagaacgagagcgaaaatgccaaagga
aaggatgctatagagaaagcatttgtcaatcaccttgtcagcgcagtgtcaaacaaaaga
caaaacctgccgaacccatttttgaagcccgacagacctcggatgtccagaagcgcgcac
cagtcgcccgtgatgcggccccaacaacccctccacaaccccttcctgaggcagcccagc
cctcggcggaggagtttccacgagttgcacctcaacaccttccccatgaaccccaagcct
cgaacgagaaatgtgcataccgtcgtaggagtgagtccattcctgaaacacgtcaatgcc
aaccaccaggcgaactatctgcgacaggacaacccaccccgaccgagaagtgccgttgaa
ttcccatttaaagaacttgagccaaacggcatcgttctgcaaagactgccggggagacgg
gagtcggcagtatga
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