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KEGG   Thamnophis sirtalis (common garter snake): 106542003
Entry
106542003         CDS       T06107                                 
Symbol
CHRNA4
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-4
  KO
K04806  nicotinic acetylcholine receptor alpha-4
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    106542003 (CHRNA4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:tsr04040]
    106542003 (CHRNA4)
Ion channels [BR:tsr04040]
 Ligand-gated channels
  Acetylcholine (nicotinic)
   106542003 (CHRNA4)
SSDB
Motif
Pfam: Neur_chan_LBD Neur_chan_memb DUF2417
Other DBs
NCBI-GeneID: 106542003
NCBI-ProteinID: XP_013913076
UniProt: A0A6I9XFY6
LinkDB
Position
Unknown
AA seq 619 aa
MARRRGRSPMGFLACQEPLLLLLCANFFPALGHVETRAHAEERLLKKLFSGYNKWSRPVA
NISDVVIVRFGLSIAQLIDVDEKNQMMTTNVWVKQEWHDYKLRWDPDEYENVTSIRIPSE
LIWRPDIVLYNNADGDFAVTHLTKAHLFYDGRIKWTPPAIYKSSCSIDVTFFPFDQQNCT
MKFGSWTYDKAKIDLESMHHHVDQLDYWESGEWVIINAVGNYNIKKYECCSEIYPDITYS
FIIRRLPLFYTINLIIPCLLISCLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEII
PSTSLVIPLIGEYLLFTMIFVTLSIIITVFVLNVHHRSPRTHTMPDWVRRVFLDVVPRLL
FMKRPSAVKDNCKKLIESMHKIANSQRFWSETEVEPNFITSSSNSPPSNEQSPTSSFGTQ
LEDQKSPQPVCKSPSGQYSMLPNPEPIRGSCTSLQPPSHPLGDLQSGSMGQGRSLSVQQM
YSSSGKAEEGTIRYRSKSIQYCYLQEEASQTNGQSSGSPASPQGHLNVDQPKAKAIHCKC
KCKKKESASTSGQGSKAHKEQQFLLMSPALKLAVEGVHYIADHLRAEDADFSAAGIGGGH
DNPRYMEQAENGTRGGGKG
NT seq 1860 nt   +upstreamnt  +downstreamnt
atggctcggcgtcggggccgctccccgatgggattcctcgcgtgtcaggagccgctcctg
ctcctgctctgcgcaaacttcttccccgctcttggccatgtggaaacccgggcgcatgcc
gaggaacgcctcctgaagaaacttttctctggatacaacaaatggtccaggccagttgct
aatatttccgatgttgtcattgtgcgttttggattgtccattgctcagcttatagatgtg
gatgaaaagaaccaaatgatgaccacgaatgtttgggtgaaacaagagtggcatgattat
aagttacgttgggatcctgacgaatacgagaacgtaacgtcgatacgaatcccatctgag
cttatttggagaccggacatagttctttacaacaacgctgatggggatttcgcggtcacc
cacctgaccaaagcccacctcttctacgacggtcggatcaaatggacgccccccgccatc
tacaaaagctcgtgcagcatcgacgtcaccttcttccccttcgaccaacagaactgcacg
atgaagttcggttcgtggacttacgacaaggccaagatcgacctagaaagcatgcaccac
catgtggaccaactggattactgggagagcggcgaatgggtgatcatcaatgctgtgggc
aactacaacatcaagaagtacgagtgctgttcggagatctatccagacatcacctattcc
ttcatcatccggcgtctccctctgttctataccatcaacttgattattccttgtcttctg
atctcgtgcttgaccgtcttggtcttctacttgccctctgagtgtggggagaagatcacc
ctatgcatctccgtcctgctgtccttgactgtcttccttcttctcatcaccgagatcatc
ccctccacgtccttggtcatccccttgatcggcgagtacctcctcttcaccatgatcttc
gtcaccttgtctatcatcatcaccgtcttcgtgctcaacgtccaccaccgttcccccagg
acccacaccatgcccgactgggtgcggcgggttttcctggatgtcgtcccgcgcctcctc
ttcatgaagcgcccttcggcagtcaaggacaactgcaagaagctcatcgagtccatgcac
aaaatagccaactcgcaacgcttttggtcggagacagaagtggagcccaactttatcacc
tcgtcatccaacagcccgccgagcaatgaacagtccccgacgtcgtcctttgggacccaa
cttgaggaccaaaaaagtccacagccggtgtgtaagtcaccctctggccagtattcaatg
ctgcctaacccagaacccatccgaggtagctgcacctcactccagcctcccagtcacccg
cttggagaccttcagtccggctcaatgggccaaggccgatccttaagtgtccagcagatg
tacagcagctcaggaaaagcggaagaagggaccatacgttaccgatccaagagcatccaa
tactgctacttgcaagaagaggcttcccagaccaacggccagtccagtgggtcaccagcg
tccccgcagggccacctgaacgtggaccagcctaaagccaaagccatccactgtaaatgt
aaatgtaaaaagaaggaatccgccagcacgtcgggacaagggagcaaagcccataaggag
cagcagtttttgctcatgtcacccgccttgaagttagccgtcgaaggcgtgcattatatc
gcagaccacttgagagcagaagacgctgatttctcagcagcagggataggtggtggtcac
gacaatccccgctacatggaacaggctgaaaatgggacacgtggaggcggcaaagggtag

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